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We have developed a large amount of
software that we make freely available.
Mostly these are Bioinformatics programs, but we also
provide some general utilities and odds and ends.
We also have more software on our github pages.
Protein least-squares fitting
A set of command-line tools for handling (primarily)
A pairwise Needleman and Wunsch sequence alignment program
Calculates protein void volumes and packing quality
Space filling pictures using the quad-tree algorithm
A graphical interface to Andrej Sali's Modeller program
Calculates backbone torsion angles from a PDB file
'Sequence Analysis Plugin Tool Framework'
A command-line wrapper to the PRODORIC web site
'Automated Protein Annotation Tool'
A library of C routines for general programming and handling
A Python library for reading and handling protein protein structure
Handle buttons on a navigation bar (just click to download)
A batch queueing system for small farms of machines
A program to perform hierarchical cluster analysis on a
set of arbitrary vectors
A program to generate HTML documentation from C source
Patches to other software
A patch for the popular 'mirror' program
A patch for the GNU 'wdiff' program (V0.5) to fix a bug under Linux