Downloads
Guidance
You can download some general guidance
on what is expected. See the Good Code
section for further help.
Data files
The number of entries is the number of gene LOCUS entries that a
chromosome contains. The chromosome with the smallest number of
entries is Chromosome 18 (111 entries) if you want a smaller
example for testing purposes. You might also want to check that your
code behaves correctly on the largest entry which is Chromosome 6
(6069 entries).
Download the appropriate file for the chromosome allocated to your
group. These files contain Genbank records containing human genomic
DNA with coding sequences.
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_1.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_2.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_3.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_4.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_5.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_6.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_7.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_8.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_9.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_10.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_11.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_12.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_13.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_14.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_15.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_16.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_17.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_18.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_19.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_20.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_21.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_22.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_X.gz
- wget http://www.bioinf.org.uk/teaching/bbk/biocomp2/project/data/chrom_CDS_Y.gz