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InPDBZone.c
Go to the documentation of this file.
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/************************************************************************/
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/**
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\file InPDBZone.c
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\version V1.8
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\date 07.07.14
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\brief
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\copyright (c) UCL / Dr. Andrew C. R. Martin 1993-2014
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\author Dr. Andrew C. R. Martin
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\par
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Institute of Structural & Molecular Biology,
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University College London,
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Gower Street,
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London.
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WC1E 6BT.
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\par
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andrew@bioinf.org.uk
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andrew.martin@ucl.ac.uk
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**************************************************************************
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This code is NOT IN THE PUBLIC DOMAIN, but it may be copied
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according to the conditions laid out in the accompanying file
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COPYING.DOC.
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The code may be modified as required, but any modifications must be
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documented so that the person responsible can be identified.
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The code may not be sold commercially or included as part of a
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commercial product except as described in the file COPYING.DOC.
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**************************************************************************
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Description:
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============
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**************************************************************************
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Usage:
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======
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**************************************************************************
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Revision History:
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=================
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- V1.0 30.09.92 Original
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- V1.1 16.06.93 Tidied for book. Mode now a char.
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- V1.2 18.06.96 Added InPDBZone() from QTree program
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- V1.3 19.09.96 Added InPDBZoneSpec()
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- V1.4 24.02.14 Added BiopInPDBZone() By: CTP
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- V1.5 25.02.14 Added error message for InPDBZone(). By: CTP
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- V1.6 02.03.14 Use strcmp to compare inserts.
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Bugfix for insert residues. By: CTP
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- V1.7 07.05.14 Moved InPDBZone() to deprecated.h By: CTP
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- V1.8 07.07.14 Use bl prefix for functions By: CTP
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*************************************************************************/
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/* Doxygen
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-------
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#GROUP Handling PDB Data
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#SUBGROUP Searching the PDB linked list
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#FUNCTION blInPDBZone()
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Checks that atom stored in PDB pointer p is within the specified
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residue range.
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*/
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/************************************************************************/
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/* Includes
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*/
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#include "
SysDefs.h
"
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#include "
pdb.h
"
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/************************************************************************/
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/* Defines and macros
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*/
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/************************************************************************/
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/* Globals
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*/
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/************************************************************************/
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/* Prototypes
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*/
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/************************************************************************/
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/*>BOOL blInPDBZone(PDB *p, char *chain, int resnum1, char *insert1,
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int resnum2, char *insert2)
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-----------------------------------------------------------------
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*/
/**
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\param[in] *p Pointer to a PDB record
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\param[in] *chain Chain name
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\param[in] resnum1 First residue
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\param[in] *insert1 First insert code
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\param[in] resnum2 Second residue
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\param[in] *insert2 Second insert code
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\return Is p in the range specified?
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Checks that atom stored in PDB pointer p is within the specified
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residue range.
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N.B. This assumes ASCII coding.
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- 24.02.14 Based on InPDBZone() but takes chain and inserts as stings
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instead of chars. By: CTP
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- 02.03.14 Use strcmp to compare inserts.
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Fixed bug handling insert residues where start and finish of
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zone have same residue number. By: CTP
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- 07.07.14 Renamed to blInPDBZone(). Use bl prefix for functions By: CTP
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*/
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BOOL
blInPDBZone
(
PDB
*p,
char
*chain,
int
resnum1,
char
*insert1,
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int
resnum2,
char
*insert2)
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{
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if
(
CHAINMATCH
(p->
chain
,chain))
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{
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/* If residue number is *within* the range, return TRUE */
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if
((p->
resnum
> resnum1) && (p->
resnum
< resnum2))
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{
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return
(
TRUE
);
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}
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/* If the range has a single residue number, check both inserts */
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else
if
((p->
resnum
== resnum1) && (p->
resnum
== resnum2))
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{
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if
((strcmp(p->
insert
, insert1) >= 0) &&
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(strcmp(p->
insert
, insert2) <= 0))
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return
(
TRUE
);
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}
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/* If residue number matches ends of range check insert */
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else
if
(((p->
resnum
== resnum1) &&
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(strcmp(p->
insert
, insert1) >= 0)) ||
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((p->
resnum
== resnum2) &&
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(strcmp(p->
insert
, insert2) <= 0)))
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{
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return
(
TRUE
);
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}
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}
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return
(
FALSE
);
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}
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pdb.h
Include file for PDB routines.
pdb_entry::resnum
int resnum
Definition:
pdb.h:310
BOOL
short BOOL
Definition:
SysDefs.h:64
pdb_entry
Definition:
pdb.h:298
FALSE
#define FALSE
Definition:
macros.h:223
blInPDBZone
BOOL blInPDBZone(PDB *p, char *chain, int resnum1, char *insert1, int resnum2, char *insert2)
Definition:
InPDBZone.c:115
TRUE
#define TRUE
Definition:
macros.h:219
CHAINMATCH
#define CHAINMATCH(chain1, chain2)
Definition:
pdb.h:495
SysDefs.h
System-type variable type definitions.
pdb_entry::chain
char chain[blMAXCHAINLABEL]
Definition:
pdb.h:321
pdb_entry::insert
char insert[8]
Definition:
pdb.h:320
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