FitNCaCPDB.c File Reference

Fit two PDB linked lists. Also a weighted fit and support routines. More...

#include <math.h>
#include <stdlib.h>
#include <string.h>
#include "MathType.h"
#include "SysDefs.h"
#include "macros.h"
#include "fit.h"
#include "pdb.h"

Go to the source code of this file.

Functions
BOOL	blFitNCaCPDB (PDB *ref_pdb, PDB *fit_pdb, REAL rm[3][3])

Detailed Description

Fit two PDB linked lists. Also a weighted fit and support routines.

Version

V1.5

Date

19.08.14

Copyright

(c) UCL / Dr. Andrew C. R. Martin 1993-6

Author

Dr. Andrew C. R. Martin

Institute of Structural & Molecular Biology, University College London, Gower Street, London. WC1E 6BT.

andre.nosp@m.w@bi.nosp@m.oinf..nosp@m.org..nosp@m.uk andre.nosp@m.w.ma.nosp@m.rtin@.nosp@m.ucl..nosp@m.ac.uk

This code is NOT IN THE PUBLIC DOMAIN, but it may be copied according to the conditions laid out in the accompanying file COPYING.DOC.

The code may be modified as required, but any modifications must be documented so that the person responsible can be identified.

The code may not be sold commercially or included as part of a commercial product except as described in the file COPYING.DOC.

Description:

Usage:

Revision History:

• V1.0 01.03.94 Original release
• V1.1 11.03.94 Fixed bug in calls to matfit(). Had not been changed to reflect modification in MatMult3_33().
• V1.2 14.03.94 Fixed FitPDB(); wasn't filling in the output matrix
• V1.3 14.03.96 Added FitCaPDB() Changed FitPDB() and FitCaCbPDB() to use ApplyMatrixPDB() rather than RotatePDB() since the PDB linked lists are already at the origin
• V1.4 07.07.14 Use bl prefix for functions By: CTP
• V1.5 19.08.14 Added AsCopy suffix to calls to blSelectAtomsPDB() By: CTP

Definition in file FitNCaCPDB.c.

Function Documentation

BOOL blFitNCaCPDB	(	PDB *	ref_pdb,
		PDB *	fit_pdb,
		REAL	rm[3][3]
	)

Parameters

[in]	*ref_pdb	Reference PDB linked list
[in,out]	*fit_pdb	Mobile PDB linked list
[out]	rm	Rotation matrix (May be input as NULL).

Returns

Success

Fits two PDB linked lists using only the N, CA, C atoms.

Actually fits fit_pdb onto ref_pdb and also returns the rotation matrix. This may be NULL if these data are not required.

• 12.12.01 Original based on FitCaPDB() By: ACRM
• 07.07.14 Use bl prefix for functions By: CTP
• 19.08.14 Added AsCopy suffix to calls to blSelectAtomsPDB() By: CTP

Definition at line 114 of file FitNCaCPDB.c.