Protein Modelling
Andrew C.R. Martin


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Table of contents

Protein Modelling Andrew C.R. Martin

Bioinformatics (BBSRC)

Bioinformatics - My Viewpoint

My Interests - General

My Interests - Specific

Why do I need a structure?

How to obtain a structure

Protein Sequences

Sequence Alignment

Dynamic Programming

Primary Databases

Database Searching

Searching Methods

FASTA - Method

Secondary Databases

Other Databanks

BLAST

PSI-BLAST

Threading and Fold Recognition

Comparative Modelling

Accuracy of Models in CASP2

Factors Affecting Model Quality

Alignment is the Key Factor

Protein Structure

Protein Structure

Protein Structure

Protein Structure

Comparative Modelling

Modelling Methods

COMPOSER

SwissModel

MODELLER

Antibodies - a special case

Recommended URLs

Author: Andrew C.R. Martin

E-mail: A.C.R.Martin@reading.ac.uk

Homepage: http://sapc34.rdg.ac.uk/~andrew/

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