Detailed Description

: Institute of Structural & Molecular Biology, University College London, Gower Street, London. WC1E 6BT.

: andre.nosp@m.w@bi.nosp@m.oinf..nosp@m.org..nosp@m.uk andre.nosp@m.w.ma.nosp@m.rtin@.nosp@m.ucl..nosp@m.ac.uk

This code is NOT IN THE PUBLIC DOMAIN, but it may be copied according to the conditions laid out in the accompanying file COPYING.DOC.

The code may be modified as required, but any modifications must be documented so that the person responsible can be identified.

The code may not be sold commercially or included as part of a commercial product except as described in the file COPYING.DOC.

Description:

V1.0 29.09.92 Original
V1.1 07.06.93 Corrected allocation
V1.2 18.06.93 Handles multi-chains and skips NTER and CTER residues. Added SplitSeq()
V1.3 09.07.93 SplitSeq() cleans up properly if allocation failed
V1.4 11.05.94 Added TrueSeqLen()
V1.5 13.05.94 Fixed bug in PDB2Seq(). Added KnownSeqLen().
V1.6 07.09.94 Fixed allocation bug in SplitSeq()
V1.7 19.07.95 Added check for ATOM records
V1.8 24.01.96 Fixed bug when no ATOM records in linked list Returns a blank string
V1.9 26.08.97 Renamed DoPDB2Seq() with handling of Asx/Glx and protein-only. Added macros to recreate the old PDB2Seq() interface and similar new calls
V1.10 02.10.00 Added NoX option
V1.11 07.07.14 Use bl prefix for functions By: CTP

Definition in file TrueSeqLen.c.

int blTrueSeqLen ( char * sequence )

Parameters

[in] *sequence A sequence containing deletions

Scans a 1-letter code sequence and calculate the length without `-' or ` ' residues

Definition at line 106 of file TrueSeqLen.c.